Neuroscience needs Network Science

Dániel L Barabási, Ginestra Bianconi, Ed Bullmore, Mark Burgess, SueYeon Chung, Tina Eliassi-Rad, Dileep George, István A. Kovács, Hernán Makse, Christos Papadimitriou, Thomas E. Nichols, Olaf Sporns, Kim Stachenfeld, Zoltán Toroczkai, Emma K. Towlson, Anthony M Zador, Hongkui Zeng, Albert-László Barabási, Amy Bernard, György Buzsáki

The brain is a complex system comprising a myriad of interacting elements, posing significant challenges in understanding its structure, function, and dynamics. Network science has emerged as a powerful tool for studying such intricate systems, offering a framework for integrating multiscale data and complexity. Here, we discuss the application of network science in the study of the brain, addressing topics such as network models and metrics, the connectome, and the role of dynamics in neural networks. We explore the challenges and opportunities in integrating multiple data streams for understanding the neural transitions from development to healthy function to disease, and discuss the potential for collaboration between network science and neuroscience communities. We underscore the importance of fostering interdisciplinary opportunities through funding initiatives, workshops, and conferences, as well as supporting students and postdoctoral fellows with interests in both disciplines. By uniting the network science and neuroscience communities, we can develop novel network-based methods tailored to neural circuits, paving the way towards a deeper understanding of the brain and its functions.

Read the full article at: arxiv.org

The 10 features of complex systems: Part 1

In most of our episodes so far, we’ve taken a single concept and looked at it through the context of a single example. But in this episode and the next, we’re going to pull back the camera to get a bird’s-eye view of complexity science, by exploring the features common to all complex systems.

We’re joined again by Karoline Wiesner, Professor of Complexity Science in the Department of Physics and Astronomy at the University of Potsdam in Germany. In this episode, Karoline is going to explain four conditions that we see in complexity science: numerosity, disorder and diversity, feedback, and non-equilibrium. At the end of the episode, she’s going to bring them all together to explain a central concept of complex systems: emergence.

Listen at: omny.fm

DomiRank Centrality: revealing structural fragility of complex networks via node dominance

Marcus Engsig, Alejandro Tejedor, Yamir Moreno, Efi Foufoula-Georgiou, Chaouki Kasmi

Determining the key elements of interconnected infrastructure and complex systems is paramount to ensure system functionality and integrity. This work quantifies the dominance of the networks’ nodes in their respective neighborhoods, introducing a novel centrality metric, DomiRank, that integrates local and global topological information via a tunable parameter. We present an analytical formula and an efficient parallelizable algorithm for DomiRank centrality, making it applicable to massive networks. DomiRank systematically outperforms other centrality metrics in generating targeted attacks that effectively compromise network structure and disrupt its functionality for synthetic and real-world topologies. Moreover, we show that DomiRank-based attacks inflict more enduring damage in the network, hindering its ability to rebound, and thus, impairing system resilience. DomiRank centrality capitalizes on the competition mechanism embedded in its definition to expose the fragility of networks, paving the way to design strategies to mitigate vulnerability and enhance the resilience of critical infrastructures.

Read the full article at: arxiv.org

Wastewater monitoring can anchor global disease surveillance systems

Aparna Keshaviah, Megan B Diamond, Matthew J Wade, Samuel V Scarpino, on behalf of theGlobal Wastewater Action Group

The Lancet Global Health VOLUME 11, ISSUE 6, E976-E981, JUNE 2023

To inform the development of global wastewater monitoring systems, we surveyed programmes in 43 countries. Most programmes monitored predominantly urban populations. In high-income countries (HICs), composite sampling at centralised treatment plants was most common, whereas grab sampling from surface waters, open drains, and pit latrines was more typical in low-income and middle-income countries (LMICs). Almost all programmes analysed samples in-country, with an average processing time of 2·3 days in HICs and 4·5 days in LMICs. Whereas 59% of HICs regularly monitored wastewater for SARS-CoV-2 variants, only 13% of LMICs did so. Most programmes share their wastewater data internally, with partnering organisations, but not publicly. Our findings show the richness of the existing wastewater monitoring ecosystem. With additional leadership, funding, and implementation frameworks, thousands of individual wastewater initiatives can coalesce into an integrated, sustainable network for disease surveillance—one that minimises the risk of overlooking future global health threats.

Read the full article at: www.thelancet.com

Nested Selves: Self-Organisation and Shared Markov Blankets in Prenatal Development in Humans

Anna Ciaunica, Michael Levin, Fernando Rosas, Karl Friston

The immune system is a central component of organismic function in humans. This paper addresses self-organisation of a biological system in relation to — and nested within — an other biological system in pregnancy. Pregnancy constitutes a fundamental state for human embodiment and a key step in the evolution and conservation of our species. While not all humans can be pregnant, our initial state of emerging and growing within another person’s body is universal. Hence, the pregnant state does not concern some individuals, but all individuals. Indeed, the hierarchical relationship in pregnancy reflects an even earlier autopoietic process in the embryo by which the number of individuals in a single blastoderm is dynamically determined by cell-cell interactions. The relationship, and the interactions between the two self-organising systems during pregnancy may play a pivotal role in understanding the nature of biological self-organisation per se in humans. Specifically, we consider the role of the immune system in biological self-organisation in addition to neural/brain systems that furnish us with a sense of self. We examine the complex case of pregnancy, whereby two immune systems need to negotiate exchange of resources and information in order to maintain viable self-regulation of nested systems. We conclude with a proposal for the mechanisms—that scaffold the complex relationship between two self-organising systems in pregnancy—through the lens of the Active Inference, with a focus on shared Markov blankets.

Read the full article at: psyarxiv.com